raremaprare-disease reference indexOrphadata 2026-06-23 · HPO 2026-09-01
ORPHA:35612

Isolated complete colobomatous microphthalmia

Synonyms: Nanophthalmos · Nanophthalmia

Type
Clinical subtype
Group
Subtype of disorder
Inheritance
Autosomal dominant, Autosomal recessive, Not applicable
Age of onset
Infancy, Neonatal
Status
active

A rare ophthalmic disease and a severe form of microphthalmia (small eye phenotype) characterized by a small eye with a short axial length, severe hyperopia, an elevated lens/eye ratio, and a high incidence of angle-closure glaucoma.

1

Names in Orphadata languages

12 of 12 languages
LangNameSynonyms
enIsolated complete colobomatous microphthalmiaNanophthalmos · Nanophthalmia
frMicrophtalmie colobomateuse isolée complèteNanophtalmie
deIsolierte vollständige kolobomatöse MikrophthalmieNanophthalmie · Nanophthalmus
esMicroftalmia colobomatosa completa aisladaNanoftalmia · Nanoftalmos
itMicroftalmia colobomatosa completa isolataNanoftalmia · Nanoftalmo
nlGeïsoleerde complete colobomateuze microftalmieNanoftalmie · Nanophthalmos
ptNanoftalmia
plNanoftalmia= en
csNanoftalmie= en
ukНанофтальмосНаноофтальмія
zh真性小眼球小眼症
trNanoftalmusNanoftalmi

Definition in:

2

Cross-references

qualifier = Orphanet mapping relation
SourceCodeQualifierICD relationValidation
OMIM600165BTNTvalidated
OMIM609549BTNTvalidated
OMIM611897BTNTvalidated
OMIM613517BTNTvalidated
OMIM615972BTNTvalidated
ICD-10Q11.2Especificvalidated
ICD-11LA10.0NTBTindexvalidated
MONDO0005514Evalidated
UMLSC4274282Evalidated

E exact · NTBT this ORPHAcode is narrower than the target · BTNT broader than the target · ND not decided.

3

Classification

Preferential parent (Orphanet linearisation):

Parents in the classifications (2):

No children.

4

Genes

10 direct
GeneAssociationStatusHGNCEnsemblOMIMLocusNameSource of validation
SIX6Candidate gene tested inNot yet assessedHGNC:10892ENSG0000018430260632614q23.1SIX homeobox 6
ALDH1A3Disease-causing germline mutation(s) inAssessedHGNC:409ENSG0000018425460046315q26.3aldehyde dehydrogenase 1 family member A323312594[PMID]
BEST1Disease-causing germline mutation(s) inAssessedHGNC:12703ENSG0000016799560785411q12.3bestrophin 119375515[PMID]
CRB1Disease-causing germline mutation(s) inAssessedHGNC:2343ENSG000001343766042101q31.3crumbs cell polarity complex component 119375515[PMID]
MFRPDisease-causing germline mutation(s) inAssessedHGNC:18121ENSG0000023571860622711q23.3membrane frizzled-related protein15976030[PMID]
OTX2Disease-causing germline mutation(s) inAssessedHGNC:8522ENSG0000016558860003714q22.3orthodenticle homeobox 224033328[PMID]
PRSS56Disease-causing germline mutation(s) inAssessedHGNC:39433ENSG000002374126138582q37.1serine protease 5621850159[PMID]
RAXDisease-causing germline mutation(s) inAssessedHGNC:18662ENSG0000013443860188118q21.32retina and anterior neural fold homeobox24033328[PMID]
SOX2Disease-causing germline mutation(s) inAssessedHGNC:11195ENSG000001814491844293q26.33SRY-box transcription factor 224033328[PMID]
TMEM98Disease-causing germline mutation(s) inAssessedHGNC:24529ENSG0000000604261594917q11.2transmembrane protein 9824852644[PMID]
5

Prevalence and incidence

1 record
TypeClassValueAreaQualificationValidationSource
Point prevalenceUnknown—WorldwideClass onlyNot yet validatedORPHANET

Value is Orphadata's ValMoy: the mean estimate per 100 000 for prevalence and incidence, the number of cases or families for case reports.

6

HPO phenotypes

6 annotations · validated 2016-06-01
HPOTerm (as annotated by Orphanet)Diagnostic
Very frequent (99-80%)
HP:0000610Abnormal choroid morphology
HP:0000501Glaucoma
HP:0008499High hypermetropia
HP:0000568Microphthalmia
HP:0000486Strabismus
Occasional (29-5%)
HP:0007703Abnormality of retinal pigmentation

Run the differential on the 5 obligate / very frequent terms

7

Sources for this card