raremaprare-disease reference indexOrphadata 2026-06-23 · HPO 2026-09-01
ORPHA:99776

Mosaic trisomy 9 syndrome

Synonyms: Mosaic trisomy chromosome 9 · Trisomy 9 mosaicism

Type
Malformation syndrome
Group
Disorder
Age of onset
Infancy, Neonatal
Status
active

Mosaic trisomy 9 is a rare chromosomal anomaly syndrome, with a highly variable phenotype, principally characterized by intellectual disability, growth and developmental delay, facial dysmorphism (incl. microphthalmia, deep-set eyes, low-set, malformed ears, bulbous nose, high-arched palate, micrognathia) and congenital heart defects (e.g. ventricular septal defect), as well as urogenital (e.g. hypoplastic genitalia, cryptorchidism), skeletal (congenital joint dislocations or hyperflexion, scoliosis/kyphosis) and central nervous system anomalies (hydrocephalus, Dandy-Walker malformation). Pigmentary mosaic skin lesions along the lines of Blaschko are also frequently observed.

1

Names in Orphadata languages

12 of 12 languages
LangNameSynonyms
enMosaic trisomy 9 syndromeMosaic trisomy chromosome 9 · Trisomy 9 mosaicism
frSyndrome de trisomie 9 en mosaïque
deMosaik-Trisomie 9Mosaik-Trisomie Chromosom 9
esSíndrome de trisomía 9 en mosaicoTrisomía del cromosoma 9 en mosaico
itSindrome trisomia 9 in mosaicoTrisomia 9 in mosaico · Trisomia del cromosoma 9 in mosaico
nlMozaïektrisomie 9-syndroomMozaïektrisomie chromosoom 9 · Trisomie 9 mozaïcisme
ptTrissomia 9 em mosaicismo
plZespół mozaikowej trisomii chromosomu 9= en
csMozaika trizomie 9= en
ukМозаїчна трисомія 9Мозаїчна трисомія хромосоми 9 · Трисомія 9 мозаїцизм
zh9号染色体嵌合型三体嵌合性9号染色体三体
trMozaik trizomi 9Trizomi 9 mozaisizm · 9. kromozomun mozaik trizomisi

Definition in:

2

Cross-references

qualifier = Orphanet mapping relation
SourceCodeQualifierICD relationValidation
ICD-10Q92.1NTBTattributedvalidated
ICD-11LD40.YNTBTattributedvalidated
MONDO0020490Evalidated
MeSHC535454Evalidated
UMLSC2930908Evalidated
GARD43Evalidated

E exact · NTBT this ORPHAcode is narrower than the target · BTNT broader than the target · ND not decided.

3

Classification

Preferential parent (Orphanet linearisation):

Parents in the classifications (1):

No children.

4

Genes

0 direct

Orphanet records no gene directly on this code.

5

Prevalence and incidence

2 records
TypeClassValueAreaQualificationValidationSource
Cases/families50 casesWorldwideCase(s)Validated22249800[PMID]
Point prevalence<1 / 1 000 000—WorldwideClass onlyValidatedORPHANET_22249800[PMID]

Value is Orphadata's ValMoy: the mean estimate per 100 000 for prevalence and incidence, the number of cases or families for case reports.

6

HPO phenotypes

62 annotations · validated 2016-06-01
HPOTerm (as annotated by Orphanet)Diagnostic
Very frequent (99-80%)
HP:0000028Cryptorchidism
HP:0001263Global developmental delay
HP:0001249Intellectual disability
HP:0000369Low-set ears
HP:0000568Microphthalmia
Frequent (79-30%)
HP:0000414Bulbous nose
HP:0002006Facial cleft
HP:0040019Finger clinodactyly
HP:0000218High palate
HP:0002827Hip dislocation
HP:0008736Hypoplasia of penis
HP:0012815Hypoplastic female external genitalia
HP:0001511Intrauterine growth retardation
HP:0000239Large fontanelles
HP:0001376Limitation of joint mobility
HP:0000347Micrognathia
HP:0001562Oligohydramnios
HP:0001838Rocker bottom foot
HP:0000470Short neck
HP:0001762Talipes equinovarus
HP:0001629Ventricular septal defect
Occasional (29-5%)
HP:0001654Abnormal heart valve morphology
HP:0100752Abnormal liver lobulation
HP:0002101Abnormal lung lobation
HP:0011027Abnormality of the fallopian tube
HP:0000130Abnormality of the uterus
HP:0001746Asplenia
HP:0001631Atrial septal defect
HP:0004422Biparietal narrowing
HP:0100490Camptodactyly of finger
HP:0000175Cleft palate
HP:0007957Corneal opacity
HP:0000476Cystic hygroma
HP:0001305Dandy-Walker malformation
HP:0006191Deep palmar crease
HP:0001869Deep plantar creases
HP:0001651Dextrocardia
HP:0003042Elbow dislocation
HP:0001706Endocardial fibroelastosis
HP:0002937Hemivertebrae
HP:0000085Horseshoe kidney
HP:0000126Hydronephrosis
HP:0001789Hydrops fetalis
HP:0000316Hypertelorism
HP:0000601Hypotelorism
HP:0002566Intestinal malrotation
HP:0000252Microcephaly
HP:0002983Micromelia
HP:0005562Multiple renal cysts
HP:0001643Patent ductus arteriosus
HP:0001561Polyhydramnios
HP:0000269Prominent occiput
HP:0000110Renal dysplasia
HP:0002650Scoliosis
HP:0001195Single umbilical artery
HP:0002652Skeletal dysplasia
HP:0001792Small nail
HP:0002414Spina bifida
HP:0005815Supernumerary ribs
HP:0000582Upslanted palpebral fissure
HP:0002119Ventriculomegaly
HP:0000465Webbed neck

Run the differential on the 5 obligate / very frequent terms

Annotation source: 21975655[PMID]_22249800[PMID]

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Sources for this card