raremaprare-disease reference indexOrphadata 2026-06-23 · HPO 2026-09-01
ORPHA:99646

Metaphyseal chondromatosis with D-2-hydroxyglutaric aciduria

Synonyms: MC-HGA

Type
Disease
Group
Disorder
Inheritance
Not applicable
Age of onset
Childhood, Infancy, Neonatal
Status
active

Metaphyseal chondromatosis with D-2-hydroxyglutaric aciduria is an extremely rare genetic disorder characterized by the unique association of enchondromatosis with D-2 hydroxyglutaric aciduria. Clinical features include enchondromatosis (with short stature, severe metaphyseal dysplasia and mild vertebral involvement), elevated levels of urinary 2-hydroxyglutaric acid and mild developmental delay.

1

Names in Orphadata languages

12 of 12 languages
LangNameSynonyms
enMetaphyseal chondromatosis with D-2-hydroxyglutaric aciduriaMC-HGA
frChondromatose métaphysaire avec acidurie D-2-hydroxyglutarique= en
deMetaphysäre Chondromatose mit D-2-Hydroxy-Glutarazidurie= en
esCondromatosis metafisaria con aciduria D-2-hidroxiglutárica= en
itCondromatosi metafisaria con aciduria D-2-idrossiglutarica= en
nlMetafysaire chondromatose met D-2-hydroxyglutaaracidurie= en
ptCondromatose metafisária com acidúria D-2-hidroxiglutárica= en
plChondromatoza przynasadowa z acydurią D-2-hydroksyglutarowąChrzęstniakowatość przynasadowa z kwasicą D-2-hydroksyglutarową
csMetafyzární chondromatóza s D-2-hydroxyglutarovou acidurií= en
ukМетафізарний хондроматоз з D-2-гідроксиглутаровою ацидурією= en
zh干骺端软骨瘤病伴D-2-羟基戊二酸尿症
trD-2-hidroksiglutarik asidüri ile seyreden metafizer kondromatozis

Definition in:

2

Cross-references

qualifier = Orphanet mapping relation
SourceCodeQualifierICD relationValidation
OMIM614875Evalidated
ICD-10Q78.8NTBTspecificvalidated
ICD-11LD24.2YNTBTindexvalidated
MONDO0013941Evalidated
UMLSC3553958Evalidated

E exact · NTBT this ORPHAcode is narrower than the target · BTNT broader than the target · ND not decided.

3

Classification

Preferential parent (Orphanet linearisation):

Parents in the classifications (1):

No children.

Codes that Orphanet moved or referred to this one:

4

Genes

1 direct
GeneAssociationStatusHGNCEnsemblOMIMLocusNameSource of validation
IDH1Disease-causing somatic mutation(s) inAssessedHGNC:5382ENSG000001384131477002q34isocitrate dehydrogenase (NADP(+)) 122025298[PMID]
5

Prevalence and incidence

1 record
TypeClassValueAreaQualificationValidationSource
Point prevalenceUnknown—WorldwideClass onlyNot yet validatedORPHANET

Value is Orphadata's ValMoy: the mean estimate per 100 000 for prevalence and incidence, the number of cases or families for case reports.

6

HPO phenotypes

71 annotations · validated 2021-10-27
HPOTerm (as annotated by Orphanet)Diagnostic
Obligate (100%)
HP:0012321D-2-hydroxyglutaric aciduria
Very frequent (99-80%)
HP:0011849Abnormal bone ossification
HP:0005868Metaphyseal enchondromatosis
HP:0003025Metaphyseal irregularity
HP:0003016Metaphyseal widening
HP:0005701Multiple enchondromatosis
Frequent (79-30%)
HP:0001367Abnormal joint morphology
HP:0001508Failure to thrive
HP:0001510Growth delay
HP:0001511Intrauterine growth retardation
HP:0003301Irregular vertebral endplates
HP:0030295Metaphyseal chondromatosis of femur
HP:0030296Metaphyseal chondromatosis of radius
HP:0030294Metaphyseal chondromatosis of tibia
HP:0030297Metaphyseal chondromatosis of ulna
HP:0003021Metaphyseal cupping
HP:0000926Platyspondyly
HP:0009803Short phalanx of finger
HP:0004322Short stature
Occasional (29-5%)
HP:0002453Abnormal globus pallidus morphology
HP:0007361Abnormality of the pons
HP:0007375Abnormality of the septum pellucidum
HP:0004820Acute myelomonocytic leukemia
HP:0004242Broad carpal bones
HP:0000337Broad forehead
HP:0001048Cavernous hemangioma
HP:0007486Cavernous hemangioma of the face
HP:0007033Cerebellar dysplasia
HP:0012762Cerebral white matter atrophy
HP:0012448Delayed myelination
HP:0000519Developmental cataract
HP:0000494Downslanted palpebral fissures
HP:0000958Dry skin
HP:0003029Enlargement of the ankles
HP:0011968Feeding difficulties
HP:0001290Generalized hypotonia
HP:0002970Genu varum
HP:0001263Global developmental delay
HP:0000666Horizontal nystagmus
HP:0025473Hyperpigmented papule
HP:0010576Intracranial cystic lesion
HP:0003796Irregular iliac crest
HP:0030866Large knee
HP:0001601Laryngomalacia
HP:0000343Long philtrum
HP:0004626Lumbar scoliosis
HP:0100764Lymphangioma
HP:0000256Macrocephaly
HP:0000400Macrotia
HP:0100255Metaphyseal dysplasia
HP:0001270Motor delay
HP:0002828Multiple joint contractures
HP:0011470Nasogastric tube feeding in infancy
HP:0002033Poor suck
HP:0006532Recurrent pneumonia
HP:0002098Respiratory distress
HP:0000278Retrognathia
HP:0001684Secundum atrial septal defect
HP:0100806Sepsis
HP:0000914Shield chest
HP:0000470Short neck
HP:0200035Skin plaque
HP:0011681Subarterial ventricular septal defect
HP:0000506Telecanthus
HP:0000233Thin vermilion border
HP:0000122Unilateral renal agenesis
HP:0004948Vascular tortuosity
HP:0002119Ventriculomegaly
HP:0002515Waddling gait
HP:0006610Wide intermamillary distance
HP:0012766Widened cerebral subarachnoid space

Run the differential on the 6 obligate / very frequent terms

Annotation source: 32166993[PMID]_22025298[PMID]_29744569[PMID]_22639207[PMID]

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Sources for this card