raremaprare-disease reference indexOrphadata 2026-06-23 · HPO 2026-09-01
ORPHA:79281

Alpha-N-acetylgalactosaminidase deficiency type 3

Synonyms: NAGA deficiency type 3 · Schindler disease type 3

Type
Clinical subtype
Group
Subtype of disorder
Inheritance
Autosomal recessive
Age of onset
Childhood
Status
active

A rare clinically heterogeneous type of NAGA deficiency with developmental, neurologic and psychiatric manifestations presenting at an intermediate age.

1

Names in Orphadata languages

12 of 12 languages
LangNameSynonyms
enAlpha-N-acetylgalactosaminidase deficiency type 3NAGA deficiency type 3 · Schindler disease type 3
frDéficit en alpha-N-acétyl-galactosaminidase type 3Déficit en NAGA type 3 · Maladie de Schindler type 3
deAlpha-N-Acetylgalactosaminidase-Mangel Typ 3NAGA-Mangel Typ 3 · Schindler-Krankheit Typ 3
esDeficiencia de alfa-N-acetilgalactosaminidasa tipo 3Deficiencia de NAGA tipo 3 · Enfermedad de Schindler tipo 3
itDeficit di alfa-N-acetilgalattosaminidasi, tipo 3Deficit di NAGA, tipo 3 · Malattia di Schindler, tipo 3
nlDeficiëntie van alfa-N-acetylgalactosaminidase type 3NAGA-deficiëntie type 3 · Ziekte van Schindler type 3
ptDeficiência de alfa-N-acetilgalactosaminidase tipo 3
plNiedobór alfa-N-galaktozoaminidazy typu 3Choroba Schindlera typu 3 · Niedobór NAGA typu 3
csDeficit alfa-N-acetylgalaktosaminidázy, typ 3Deficit NAGA, typ 3 · Schindlerova nemoc, typ 3
ukДефіцит альфа-N-ацетилгалактозамінідази, тип 3Дефіцит NAGA типу 3 · Хвороба Шиндлера, тип 3
zhα-N-乙酰半乳糖胺酶缺陷症3型Schindler病3型
trAlfa-N-asetilgalaktozaminidaz eksikliği tip 3NAGA eksikliği tip 3 · Schindler hastalığı tip 3

Definition in:

2

Cross-references

qualifier = Orphanet mapping relation
SourceCodeQualifierICD relationValidation
OMIM609241NTBTvalidated
ICD-10E77.1NTBTattributedvalidated
ICD-115C56.21NTBTindexvalidated
MONDO0019264Evalidated
UMLSC5437471Evalidated
GARD3903Evalidated

E exact · NTBT this ORPHAcode is narrower than the target · BTNT broader than the target · ND not decided.

3

Classification

Preferential parent (Orphanet linearisation):

Parents in the classifications (4):

No children.

4

Genes

1 direct
GeneAssociationStatusHGNCEnsemblOMIMLocusNameSource of validation
NAGADisease-causing germline mutation(s) inAssessedHGNC:7631ENSG0000019895110417022q13.2alpha-N-acetylgalactosaminidase
5

Prevalence and incidence

2 records
TypeClassValueAreaQualificationValidationSource
Cases/families10 casesWorldwideCase(s)ValidatedORPHANET
Point prevalence<1 / 1 000 000—WorldwideClass onlyValidatedORPHANET

Value is Orphadata's ValMoy: the mean estimate per 100 000 for prevalence and incidence, the number of cases or families for case reports.

6

HPO phenotypes

8 annotations · validated 2016-06-01
HPOTerm (as annotated by Orphanet)Diagnostic
Very frequent (99-80%)
HP:0000717Autism
HP:0000518Cataract
HP:0001263Global developmental delay
HP:0001249Intellectual disability
HP:0001250Seizure
HP:0000486Strabismus
Frequent (79-30%)
HP:0002240Hepatomegaly
HP:0001639Hypertrophic cardiomyopathy

Run the differential on the 6 obligate / very frequent terms

7

Sources for this card