raremaprare-disease reference indexOrphadata 2026-06-23 · HPO 2026-09-01
ORPHA:576283

SATB2-associated syndrome due to a pathogenic variant

Synonyms: SATB2-associated syndrome due to a point mutation

Type
Etiological subtype
Group
Subtype of disorder
Inheritance
Autosomal dominant
Age of onset
Antenatal, Infancy, Neonatal
Status
active

This disease is described under SATB2-associated syndrome

1

Names in Orphadata languages

12 of 12 languages
LangNameSynonyms
enSATB2-associated syndrome due to a pathogenic variantSATB2-associated syndrome due to a point mutation
frSyndrome associé à SATB2 dû à un variant pathogèneSyndrome associé à SATB2 dû à une mutation ponctuelle
deSATB2-assoziiertes Syndrom durch eine pathogene Variante
esSíndrome asociado a una variante patogénica del gen SATB2Síndrome por una mutación puntual en el gen SATB2
itMalattia correlata a SATB2 da mutazione patogeneticaMalattia correlata a SATB2 da mutazione puntiforme
nlSATB2-geassocieerd syndroom door een pathogene variantSATB2-geassocieerd syndroom door een puntmutatie
ptSíndrome SATB2-associada devido a variante patogénicaSíndrome Glass · Síndrome SATB2-associada por mutação pontual
plZespół związany z patogennym wariantem SATB2= en
csSyndrom spojený s SATB2 způsobený patogenní variantou= en
ukSATB2-асоційований синдром, зумовлений патогенним варіантомSATB2-асоційований синдром внаслідок точкової мутації
zh致病变异所致SATB2基因相关综合征点突变所致SATB2基因相关综合征
trPatojenik varyant nedeniyle SATB2-ilişkili sendromBir nokta mutasyonuna bağlı SATB2-ilişkili sendrom
2

Cross-references

qualifier = Orphanet mapping relation
SourceCodeQualifierICD relationValidation
OMIM612313NTBTvalidated
ICD-10Q87.8NTBTattributedvalidated
UMLSC5680358Evalidated

E exact · NTBT this ORPHAcode is narrower than the target · BTNT broader than the target · ND not decided.

3

Classification

Preferential parent (Orphanet linearisation):

Parents in the classifications (1):

  • ORPHA:576278SATB2-associated syndrome
    rare developmental anomalies during embryogenesis; rare genetic diseases; rare neurological diseases; rare odontological diseases; rare otorhinolaryngological diseases; rare surgical maxillo-facial diseases

No children.

4

Genes

1 direct
GeneAssociationStatusHGNCEnsemblOMIMLocusNameSource of validation
SATB2Disease-causing germline mutation(s) inAssessedHGNC:21637ENSG000001190426081482q33.1SATB homeobox 229023086[PMID]_31021519[PMID]
5

Prevalence and incidence

0 records

No prevalence record in this release.

6

HPO phenotypes

48 annotations · validated 2020-11-19
HPOTerm (as annotated by Orphanet)Diagnostic
Very frequent (99-80%)
HP:0001999Abnormal facial shape
HP:0000164Abnormality of the dentition
HP:0001263Global developmental delay
HP:0001249Intellectual disability
Frequent (79-30%)
HP:0002500Abnormal cerebral white matter morphology
HP:0000924Abnormality of the skeletal system
HP:0000504Abnormality of vision
HP:0001344Absent speech
HP:0007018Attention deficit hyperactivity disorder
HP:0000708Atypical behavior
HP:0000729Autistic behavior
HP:0410263Brain imaging abnormality
HP:0011304Broad thumb
HP:0000175Cleft palate
HP:0000490Deeply set eye
HP:0012448Delayed myelination
HP:0002307Drooling
HP:0000324Facial asymmetry
HP:0008872Feeding difficulties in infancy
HP:0008947Floppy infant
HP:0040082Happy demeanor
HP:0002342Intellectual disability, moderate
HP:0010864Intellectual disability, severe
HP:0000343Long philtrum
HP:0000347Micrognathia
HP:0000938Osteopenia
HP:0008897Postnatal growth retardation
HP:0002360Sleep abnormality
HP:0000319Smooth philtrum
HP:0000219Thin upper lip vermilion
Occasional (29-5%)
HP:0100886Abnormality of globe location
HP:0001155Abnormality of the hand
HP:0000951Abnormality of the skin
HP:0000193Bifid uvula
HP:0002608Celiac disease
HP:0004209Clinodactyly of the 5th finger
HP:0002015Dysphagia
HP:0002020Gastroesophageal reflux
HP:0001510Growth delay
HP:0000218High palate
HP:0001382Joint hypermobility
HP:0001601Laryngomalacia
HP:0100559Lower limb asymmetry
HP:0002465Poor speech
HP:0001250Seizure
HP:0001773Short foot
HP:0000486Strabismus
HP:0011147Typical absence seizure

Run the differential on the 4 obligate / very frequent terms

Annotation source: 28139846[PMID]_ 28139846[PMID]_ 28139846[PMID]

7

Sources for this card