raremaprare-disease reference indexOrphadata 2026-06-23 · HPO 2026-09-01
ORPHA:521258

Xq25 microduplication syndrome

Synonyms: Dup(X)(q25) · Xq25 microtriplication

Type
Malformation syndrome
Group
Disorder
Age of onset
Childhood, Infancy
Status
active

A rare, X-linked, multiple congenital anomalies/dysmorphic malformation-intellectual disability syndrome characterized by developmental delay, mild to moderate intellectual disability, speech disturbance, behavioral problems (such as anxiety, hyperactivity, and aggressiveness) and mild facial dysmorphism (including facial hypotonia, thin arched eyebrows, ectropion, epicanthus, malar flatness, thick vermillion of the lips and prognathia). Additional variable manifestations include short stature, skeletal and genital anomalies, seizures, and autism spectrum disorders. Brain imaging may reveal cerebellar vermis hypoplasia, thin corpus callosum, and enlarged subarachnoid spaces.

1

Names in Orphadata languages

12 of 12 languages
LangNameSynonyms
enXq25 microduplication syndromeDup(X)(q25) · Xq25 microtriplication
frSyndrome de microduplication Xq25Dup(X)(q25) · Microtriplication Xq25
deMikroduplikationssyndrom Xq25Dup(X)(q25q25) · Mikrotriplikation Xq25
esSíndrome de microduplicación Xq25Dup(X)(q25) · Microtriplicación Xq25
itSindrome da microduplicazione Xq25Dup(X)(q25) · Microtriplicazione Xq25
nlXq25-microduplicatiesyndroomDup(X)(q25) · Xq25-microtriplicatie
ptSíndrome de microduplicação Xq25
plZespół mikroduplikacji Xq25Dup(X)(q25) · Mikrotriplikacja Xq25
csSyndrom mikroduplikace Xq25Dup(X)(q25)
ukСиндром мікродуплікації Xq25Dup(X)(q25) · Мікротріплікація Xq25
zh染色体Xq25 微重复综合征X染色体q25微三倍体重复
trXq25 mikroduplikasyon sendromuDup(X)(q25) · Xq25 Xq25 mikrotriplikasyon

Definition in:

2

Cross-references

qualifier = Orphanet mapping relation
SourceCodeQualifierICD relationValidation
OMIM300979Evalidated
ICD-10Q98.8NTBTattributedvalidated
MONDO0010507Evalidated
UMLSC5447842Evalidated

E exact · NTBT this ORPHAcode is narrower than the target · BTNT broader than the target · ND not decided.

3

Classification

Preferential parent (Orphanet linearisation):

Parents in the classifications (3):

No children.

4

Genes

1 direct
GeneAssociationStatusHGNCEnsemblOMIMLocusNameSource of validation
STAG2Role in the phenotype ofAssessedHGNC:11355ENSG00000101972300826Xq25STAG2 cohesin complex component25677961[PMID]_26443594[PMID]
5

Prevalence and incidence

2 records
TypeClassValueAreaQualificationValidationSource
Cases/families28 casesWorldwideCase(s)Validated26443594[PMID]
Point prevalence<1 / 1 000 000—WorldwideClass onlyValidatedORPHANET_26443594[PMID]

Value is Orphadata's ValMoy: the mean estimate per 100 000 for prevalence and incidence, the number of cases or families for case reports.

6

HPO phenotypes

20 annotations · validated 2019-05-29
HPOTerm (as annotated by Orphanet)Diagnostic
Frequent (79-30%)
HP:0008050Abnormality of the palpebral fissures
HP:0000739Anxiety
HP:0000729Autistic behavior
HP:0001321Cerebellar hypoplasia
HP:0000286Epicanthus
HP:0000297Facial hypotonia
HP:0001290Generalized hypotonia
HP:0001263Global developmental delay
HP:0002553Highly arched eyebrow
HP:0000752Hyperactivity
HP:0002079Hypoplasia of the corpus callosum
HP:0002342Intellectual disability, moderate
HP:0000272Malar flattening
HP:0000303Mandibular prognathia
HP:0001250Seizure
HP:0002360Sleep abnormality
HP:0045075Sparse eyebrow
HP:0009088Speech articulation difficulties
HP:0012471Thick vermilion border
Occasional (29-5%)
HP:0004322Short stature

Annotation source: 16840569[PMID]_23637084[PMID]

7

Sources for this card