raremaprare-disease reference indexOrphadata 2026-06-23 · HPO 2026-09-01
ORPHA:508498

Intellectual disability-cardiac anomalies-short stature-joint laxity syndrome

Synonyms: Intellectual disability-cardiac anomalies-short stature-joint laxity syndrome due to mutation in PUF60 gene

Type
Malformation syndrome
Group
Disorder
Inheritance
Autosomal dominant
Age of onset
Infancy, Neonatal
Status
active

A rare genetic multiple congenital anomalies/dysmorphic syndrome characterized by intrauterine and postnatal growth restriction, global developmental delay, intellectual disability, and dysmorphic facial features (such as broad nasal root, anteverted nares, long philtrum, low-set and posteriorly rotated ears, and short neck). Additional reported manifestations are microcephaly, short stature, vertebral abnormalities, joint laxity, ocular, cardiac, and renal defects, and minor limb anomalies. Brain imaging may show hypoplastic corpus callosum, delayed myelination, and cerebral atrophy.

1

Names in Orphadata languages

12 of 12 languages
LangNameSynonyms
enIntellectual disability-cardiac anomalies-short stature-joint laxity syndromeIntellectual disability-cardiac anomalies-short stature-joint laxity syndrome due to mutation in PUF60 gene
frSyndrome de déficience intellectuelle-cardiopathie congénitale-petite taille-laxité ligamentaireSyndrome de déficience intellectuelle-cardiopathie congénitale-petite taille-laxité ligamentaire lié à une mutation de PUF60
deIntelligenzminderung-kardiale Anomalien-Kleinwuchs-Gelenkinstabilität-Syndrom
esSíndrome de discapacidad intelectual-anomalías cardíacas-talla baja-laxitud articularSíndrome de discapacidad intelectual-anomalías cardíacas-talla baja-laxitud articular por una mutación en el gen PUF60
itSindrome disabilità intellettiva-cardiopatie-bassa statura-lassità articolareSindrome disabilità intellettiva-cardiopatie-bassa statura-lassità articolare da mutazione del gene PUF60
nlIntellectuele achterstand - hartanomalieën - kleine gestalte - gewrichtslaxiteit-syndroom
ptSíndrome de perturbação do desenvolvimento intelectual-anomalias cardíacas-baixa estatura-hipermobilidade articularSíndrome de perturbação do desenvolvimento intelectual-anomalias cardíacas-baixa estatura-hipermobilidade articular devido a mutação no gene PUF60
plZespół niepełnosprawności intelektualnej-wad serca-niskiego wzrostu-niestabilności stawów= en
csSyndrom zahrnující mentální retardaci, srdeční anomálie, malý vzrůst a hypermobilitu kloubů= en
ukСиндром інтелектуальної недостатності-серцевих аномалій-низькорослості-розхитаності суглобів
zh智力障碍-心脏畸形-身材矮小-关节松弛综合症
trZihinsel yetersizlik-kardiyak anomaliler-kısa boy-eklem gevşekliği sendromu

Definition in:

2

Cross-references

qualifier = Orphanet mapping relation
SourceCodeQualifierICD relationValidation
OMIM615583NTBTvalidated
ICD-10Q87.8NTBTattributedvalidated
ICD-11LD2F.1YNTBTattributedvalidated
MONDO0034989Evalidated
UMLSC5568572Evalidated

E exact · NTBT this ORPHAcode is narrower than the target · BTNT broader than the target · ND not decided.

3

Classification

Preferential parent (Orphanet linearisation):

Parents in the classifications (5):

No children.

4

Genes

1 direct
GeneAssociationStatusHGNCEnsemblOMIMLocusNameSource of validation
PUF60Disease-causing germline mutation(s) (loss of function) inAssessedHGNC:17042ENSG000001799506048198q24.3poly(U) binding splicing factor 6027804958[PMID]_28327570[PMID]
5

Prevalence and incidence

2 records
TypeClassValueAreaQualificationValidationSource
Cases/families18 casesWorldwideCase(s)Validated28327570[PMID]
Point prevalence<1 / 1 000 000—WorldwideClass onlyValidatedORPHANET_28327570[PMID]

Value is Orphadata's ValMoy: the mean estimate per 100 000 for prevalence and incidence, the number of cases or families for case reports.

6

HPO phenotypes

78 annotations · validated 2020-01-22
HPOTerm (as annotated by Orphanet)Diagnostic
Very frequent (99-80%)
HP:0001249Intellectual disability
Frequent (79-30%)
HP:0030680Abnormal cardiovascular system morphology
HP:0011842Abnormality of skeletal morphology
HP:0001155Abnormality of the hand
HP:0000589Coloboma
HP:0011968Feeding difficulties
HP:0002761Generalized joint hypermobility
HP:0000365Hearing impairment
HP:0000998Hypertrichosis
HP:0000343Long philtrum
HP:0000308Microretrognathia
HP:0000470Short neck
HP:0004322Short stature
HP:0000219Thin upper lip vermilion
HP:0000431Wide nasal bridge
Occasional (29-5%)
HP:00046912-3 toe syndactyly
HP:0000733Abnormal repetitive mannerisms
HP:0012795Abnormality of the optic disc
HP:0001274Agenesis of corpus callosum
HP:0007874Almond-shaped palpebral fissure
HP:0000646Amblyopia
HP:0001659Aortic regurgitation
HP:0006712Aplasia/Hypoplasia of the ribs
HP:0006695Atrioventricular canal defect
HP:0000729Autistic behavior
HP:0001647Bicuspid aortic valve
HP:0010055Broad hallux
HP:0006009Broad phalanx
HP:0011304Broad thumb
HP:0012487Cerebellopontine angle arachnoid cyst
HP:0025481Cervical hemivertebrae
HP:0004209Clinodactyly of the 5th finger
HP:0001680Coarctation of aorta
HP:0009997Duplication of phalanx of hand
HP:0000565Esotropia
HP:0001738Exocrine pancreatic insufficiency
HP:0010628Facial palsy
HP:0002949Fused cervical vertebrae
HP:0002827Hip dislocation
HP:0000085Horseshoe kidney
HP:0000974Hyperextensible skin
HP:0000540Hypermetropia
HP:0005620Hypermobility of interphalangeal joints
HP:0002079Hypoplasia of the corpus callosum
HP:0000047Hypospadias
HP:0000612Iris coloboma
HP:0000303Mandibular prognathia
HP:0000252Microcephaly
HP:0000347Micrognathia
HP:0000568Microphthalmia
HP:0000545Myopia
HP:0001052Nevus flammeus
HP:0000609Optic nerve hypoplasia
HP:0001845Overlapping toe
HP:0000767Pectus excavatum
HP:0000125Pelvic kidney
HP:0011682Perimembranous ventricular septal defect
HP:0006970Periventricular leukomalacia
HP:0001763Pes planus
HP:0001177Preaxial hand polydactyly
HP:0000104Renal agenesis
HP:0000089Renal hypoplasia
HP:0000480Retinal coloboma
HP:0009237Short 5th finger
HP:0004279Short palm
HP:0012745Short palpebral fissure
HP:0003835Shoulder subluxation
HP:0002360Sleep abnormality
HP:0002414Spina bifida
HP:0000486Strabismus
HP:0001636Tetralogy of Fallot
HP:0008467Thoracic hemivertebrae
HP:0002942Thoracic kyphosis
HP:0002943Thoracic scoliosis
HP:0001660Truncus arteriosus
HP:0007687Unilateral ptosis
HP:0001629Ventricular septal defect
HP:0002119Ventriculomegaly

Run the differential on the 1 obligate / very frequent terms

Annotation source: 28327570[PMID]_30352594[PMID]

7

Sources for this card