raremaprare-disease reference indexOrphadata 2026-06-23 · HPO 2026-09-01
ORPHA:505652

CDKL5-deficiency disorder

Synonyms: CDD

Type
Disease
Group
Disorder
Inheritance
X-linked dominant
Age of onset
Infancy, Neonatal
Status
active

A rare genetic neurodevelopmental disorder characterized by early-onset drug-resistant seizures and severe neurodevelopmental impairment with major motor development delay.

1

Names in Orphadata languages

12 of 12 languages
LangNameSynonyms
enCDKL5-deficiency disorderCDD
frTrouble du déficit en CDKL5CDD · Syndrome CDKL5 · Trouble CDKL5
deCDKL5-Mangel-SyndromCDD · CDKL5-Gen-Defekt · CDKL5-Krankheit
esTrastorno de deficiencia de CDKL5
itMalattia da deficit di CDKL5= en
nlCDKL5-deficiëntiestoornis= en
ptDoença devido a deficiência CDKL5
plEncefalopatia padaczkowa związana z CDKL5Zaburzenie z niedoboru CDKL5
csCDKL5-vázaná epileptická encefalopatieDeficit CDKL5 · Poruchy způsobené mutací CDKL5 · Porucha způsobená deficitem CDKL5
ukДефіцит CDKL5= en
zhCDKL5基因相关的癫痫脑病CDKL5基因缺陷性疾病
trCDKL5-ilişkili epileptik ensefalopatiCDKL5 eksikliği bozukluğu

Definition in:

2

Cross-references

qualifier = Orphanet mapping relation
SourceCodeQualifierICD relationValidation
OMIM300672Evalidated
ICD-10G40.4NTBTattributedvalidated
MONDO0010396Evalidated
MeSHC564064Evalidated
UMLSC4750718Evalidated
GARD12173Evalidated
MedDRA10083005Evalidated

E exact · NTBT this ORPHAcode is narrower than the target · BTNT broader than the target · ND not decided.

3

Classification

Preferential parent (Orphanet linearisation):

Parents in the classifications (4):

No children.

4

Genes

1 direct
GeneAssociationStatusHGNCEnsemblOMIMLocusNameSource of validation
CDKL5Disease-causing germline mutation(s) inAssessedHGNC:11411ENSG00000008086300203Xp22.13cyclin dependent kinase like 522872100[PMID]
5

Prevalence and incidence

4 records
TypeClassValueAreaQualificationValidationSource
Prevalence at birth1-9 / 100 000—EuropeClass onlyValidatedEpiCARE[EXPERT]_31302675[PMID]
Prevalence at birth1-9 / 1 000 0000.21 / 100 000AustraliaValue and classValidated29264392[PMID]
Prevalence at birth1-9 / 100 0002.36 / 100 000United KingdomValue and classValidated31302675[PMID]
Point prevalenceUnknown—WorldwideClass onlyValidatedORPHANET_22872100[PMID]_24564546[PMID]

Value is Orphadata's ValMoy: the mean estimate per 100 000 for prevalence and incidence, the number of cases or families for case reports.

6

HPO phenotypes

52 annotations · validated 2024-06-06
HPOTerm (as annotated by Orphanet)Diagnostic
Very frequent (99-80%)
HP:0010818Generalized tonic seizure
Frequent (79-30%)
HP:0003808Abnormal muscle tone
HP:0000729Autistic behavior
HP:0002069Bilateral tonic-clonic seizure
HP:0000337Broad forehead
HP:0009852Broad proximal phalanges of the hand
HP:0003763Bruxism
HP:0100704Cerebral visual impairment
HP:0033850Coldness
HP:0002019Constipation
HP:0002002Deep philtrum
HP:0000490Deeply set eye
HP:0002194Delayed gross motor development
HP:0000750Delayed speech and language development
HP:0000232Everted lower lip vermilion
HP:0011968Feeding difficulties
HP:0007359Focal-onset seizure
HP:0001288Gait disturbance
HP:0002020Gastroesophageal reflux
HP:0011471Gastrostomy tube feeding in infancy
HP:0001510Growth delay
HP:0001252Hypotonia
HP:0002521Hypsarrhythmia
HP:0007328Impaired pain sensation
HP:0012469Infantile spasms
HP:0001249Intellectual disability
HP:0011343Moderate global developmental delay
HP:0010841Multifocal epileptiform discharges
HP:0032794Myoclonic seizure
HP:0002421Poor head control
HP:0011220Prominent forehead
HP:0000817Reduced eye contact
HP:0011344Severe global developmental delay
HP:0006979Sleep-wake cycle disturbance
HP:0012171Stereotypical hand wringing
HP:5200061Tactile hypersensitivity
HP:0012471Thick vermilion border
Occasional (29-5%)
HP:0002104Apnea
HP:0002072Chorea
HP:0001332Dystonia
HP:0000565Esotropia
HP:0000577Exotropia
HP:0001822Hallux valgus
HP:0000348High forehead
HP:0002883Hyperventilation
HP:0002808Kyphosis
HP:0000252Microcephaly
HP:0000341Narrow forehead
HP:0000749Paroxysmal bursts of laughter
HP:0002783Recurrent lower respiratory tract infections
HP:0002650Scoliosis
HP:0000664Synophrys

Run the differential on the 1 obligate / very frequent terms

Annotation source: 35483386[PMID]_38603524[PMID]_33989939[PMID]_22872100[PMID]_27081548[PMID]

7

Sources for this card