raremaprare-disease reference indexOrphadata 2026-06-23 · HPO 2026-09-01
ORPHA:447980

19p13.3 microduplication syndrome

Synonyms: Dup(19)(p13.3)

Type
Malformation syndrome
Group
Disorder
Inheritance
Unknown
Age of onset
Antenatal, Neonatal
Status
active

A rare, genetic, syndromic intellectual disability characterized by intrauterine growth retardation, microcephaly, hypotonia, motor and neurodevelopmental delay, speech delay, intellectual disability, and mild dysmorphic features.

1

Names in Orphadata languages

12 of 12 languages
LangNameSynonyms
en19p13.3 microduplication syndromeDup(19)(p13.3)
frSyndrome de microduplication 19p13.3= en
deMikroduplikationssyndrom 19p13.3Dup(19)(p13.13)
esSíndrome de microduplicación 19p13.3Dup(19)(p13.13)
itSindrome da microduplicazione 19p13.3Dup(19)(p13.13)
nl19p13.3-microduplicatiesyndroom= en
ptSíndrome de microduplicação 19p13.3= en
plZespół mikroduplikacji 19p13.3Dup(19)(p13.13)
csMikroduplikační syndrom 19p13.3Dup(19)(p13.13)
ukСиндром мікродуплікації 19p13.3= en
zh19p13.3微重复综合征(19)(p13.13)重复
tr19p13.3 mikroduplikasyon sendromuDup(19)(p13.13)

Definition in:

2

Cross-references

qualifier = Orphanet mapping relation
SourceCodeQualifierICD relationValidation
ICD-10Q92.3NTBTattributedvalidated
MONDO0018658Evalidated
UMLSC5679996Evalidated

E exact · NTBT this ORPHAcode is narrower than the target · BTNT broader than the target · ND not decided.

3

Classification

Preferential parent (Orphanet linearisation):

Parents in the classifications (3):

No children.

4

Genes

1 direct
GeneAssociationStatusHGNCEnsemblOMIMLocusNameSource of validation
NFIXRole in the phenotype ofAssessedHGNC:7788ENSG0000000844116400519p13.13nuclear factor I X29184170[PMID]
5

Prevalence and incidence

2 records
TypeClassValueAreaQualificationValidationSource
Cases/families6 casesWorldwideCase(s)Validated25858326[PMID]
Point prevalence<1 / 1 000 000—WorldwideClass onlyValidatedORPHANET_25858326[PMID]

Value is Orphadata's ValMoy: the mean estimate per 100 000 for prevalence and incidence, the number of cases or families for case reports.

6

HPO phenotypes

51 annotations · validated 2019-12-09
HPOTerm (as annotated by Orphanet)Diagnostic
Very frequent (99-80%)
HP:0001999Abnormal facial shape
HP:0000750Delayed speech and language development
HP:0001263Global developmental delay
HP:0001511Intrauterine growth retardation
HP:0000252Microcephaly
Frequent (79-30%)
HP:0001344Absent speech
HP:0000286Epicanthus
HP:0001510Growth delay
HP:0002342Intellectual disability, moderate
HP:0000276Long face
HP:0100807Long fingers
HP:0000369Low-set ears
HP:0000347Micrognathia
HP:0001270Motor delay
HP:0000545Myopia
HP:0000160Narrow mouth
HP:0000448Prominent nose
HP:0000322Short philtrum
HP:0000506Telecanthus
HP:0012471Thick vermilion border
Occasional (29-5%)
HP:0000646Amblyopia
HP:0002059Cerebral atrophy
HP:0000175Cleft palate
HP:0030084Clinodactyly
HP:0002019Constipation
HP:0000494Downslanted palpebral fissures
HP:0002572Episodic vomiting
HP:0002373Febrile seizure (within the age range of 3 months to 6 years)
HP:0002020Gastroesophageal reflux
HP:0002827Hip dislocation
HP:0001385Hip dysplasia
HP:0030043Hip subluxation
HP:0000666Horizontal nystagmus
HP:0000752Hyperactivity
HP:0000540Hypermetropia
HP:0010864Intellectual disability, severe
HP:0003186Inverted nipples
HP:0000737Irritability
HP:0002751Kyphoscoliosis
HP:0008551Microtia
HP:0000939Osteoporosis
HP:0001761Pes cavus
HP:0000358Posteriorly rotated ears
HP:0000826Precocious puberty
HP:0002092Pulmonary arterial hypertension
HP:0100716Self-injurious behavior
HP:0000340Sloping forehead
HP:0000430Underdeveloped nasal alae
HP:0012741Unilateral cryptorchidism
HP:0000582Upslanted palpebral fissure
HP:0001629Ventricular septal defect

Run the differential on the 5 obligate / very frequent terms

Annotation source: 25858326[PMID]_20613546[PMID]

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Sources for this card