raremaprare-disease reference indexOrphadata 2026-06-23 · HPO 2026-09-01
ORPHA:401923

9q31.1q31.3 microdeletion syndrome

Synonyms: Del(9)(q31.1q31.3) · Monosomy 9q31.1q31.3

Type
Malformation syndrome
Group
Disorder
Inheritance
Unknown
Age of onset
Neonatal
Status
active

9q31.1q31.3 microdeletion syndrome is a rare, genetic, syndromic intellectual disability characterized by mild intellectual disability, short stature with high body mass index, short neck with cervical gibbus and dysmorphic facial features. A metabolic syndrome, including type 2 diabetes, hypercholesterolemia and hypertension has also been reported.

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Names in Orphadata languages

12 of 12 languages
LangNameSynonyms
en9q31.1q31.3 microdeletion syndromeDel(9)(q31.1q31.3) · Monosomy 9q31.1q31.3
frSyndrome de microdélétion 9 q31.1q31.3Del(9)(q31.1q31.3) · Monosomie 9q31.1q31.3
deMikrodeletionssyndrom 9q31.1q31.3Del(9)(q31.1q31.3) · Monosomie 9q31.1q31.3
esSíndrome de microdeleción 9q31.1q31.3Del(9)(q31.1q31.3) · Monosomía 9q31.1q31.3
itSindrome da microdelezione 9q31.1q31.3Del(9)(q31.1q31.3) · Monosomia 9q31.1q31.3
nl9q31.1q31.3-microdeletiesyndroomDel(9)(q31.1q31.3) · Monosomie 9q31.1q31.3
ptSíndrome de microdeleção 9q31.1q31.3
plZespół mikrodelecji 9q31.1q31.3Del(9)(q31.1q31.3) · Monosomia 9q31.1q31.3
csMikrodeleční syndrom 9q31.1q31.3Del(9)(q31.1q31.3) · Monozomie 9q31.1q31.3
ukСиндром мікроделеції 9q31.1q31.3Del(9)(q31.1q31.3) · Моносомія 9q31.1q31.3
zh9q31.1q31.3微缺失综合症9q31.1q31.3单体
tr9q31.1q31.3 mikrodelesyon sendromuDel(9)(q31.1q31.3) · Monozomi 9q31.1q31.3

Definition in:

2

Cross-references

qualifier = Orphanet mapping relation
SourceCodeQualifierICD relationValidation
ICD-10Q93.5NTBTattributedvalidated
MONDO0018428Evalidated
UMLSC4750910Evalidated

E exact · NTBT this ORPHAcode is narrower than the target · BTNT broader than the target · ND not decided.

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Classification

Preferential parent (Orphanet linearisation):

Parents in the classifications (3):

No children.

4

Genes

0 direct

Orphanet records no gene directly on this code.

5

Prevalence and incidence

2 records
TypeClassValueAreaQualificationValidationSource
Cases/families2 casesWorldwideCase(s)Validated24376033[PMID]
Point prevalence<1 / 1 000 000—WorldwideClass onlyValidatedORPHANET_24376033[PMID]

Value is Orphadata's ValMoy: the mean estimate per 100 000 for prevalence and incidence, the number of cases or families for case reports.

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HPO phenotypes

22 annotations · validated 2019-12-04
HPOTerm (as annotated by Orphanet)Diagnostic
Frequent (79-30%)
HP:0001999Abnormal facial shape
HP:0001659Aortic regurgitation
HP:0001647Bicuspid aortic valve
HP:0011822Broad chin
HP:0000455Broad nasal tip
HP:0002947Cervical kyphosis
HP:0001644Dilated cardiomyopathy
HP:0012368Flat face
HP:0002553Highly arched eyebrow
HP:0003124Hypercholesterolemia
HP:0001256Intellectual disability, mild
HP:0000303Mandibular prognathia
HP:0011342Mild global developmental delay
HP:0025502Overweight
HP:0100817Renovascular hypertension
HP:0000894Short clavicles
HP:0000470Short neck
HP:0004322Short stature
HP:0200055Small hand
HP:0001182Tapered finger
HP:0100874Thick hair
HP:0005978Type II diabetes mellitus

Annotation source: 24376033[PMID]

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Sources for this card