raremaprare-disease reference indexOrphadata 2026-06-23 · HPO 2026-09-01
ORPHA:379

Chronic granulomatous disease

Synonyms: CGD · Chronic septic granulomatosis

Type
Disease
Group
Disorder
Inheritance
Autosomal recessive, X-linked recessive
Age of onset
Adolescent, Adult, Childhood, Infancy
Status
active

A rare primary immunodeficiency, mainly affecting phagocytes, which is characterized by an increased susceptibility to severe and recurrent bacterial and fungal infections, along with the development of granulomas.

1

Names in Orphadata languages

12 of 12 languages
LangNameSynonyms
enChronic granulomatous diseaseCGD · Chronic septic granulomatosis
frGranulomatose chroniqueCGD · Granulomatose septique chronique
deGranulomatose, chronischeCGD · Chronische septische Granulomatose
esEnfermedad granulomatosa crónicaCGD · Granulomatosis séptica crónica
itMalattia granulomatosa cronicaCGD · Granulomatosi settica cronica
nlChronische granulomateuze ziekteCGD · Chronische septische granulomatose
ptDoença granulomatosa crónica
plPrzewlekła choroba ziarniniakowaCGD · Przewlekła septyczna choroba ziarniniakowa
csChronická granulomatózaCGD · Chronická septická granulomatóza · Chronická granulomatózní choroba
ukХронічна гранулематозна хворобаCGD · Хронічний септичний гранулематоз
zh慢性肉芽肿病慢性脓毒性肉芽肿病
trKronik granülomatöz hastalığıCGD · Kronik septik granülomatoz

Definition in:

2

Cross-references

qualifier = Orphanet mapping relation
SourceCodeQualifierICD relationValidation
OMIM233690BTNTvalidated
OMIM233700BTNTvalidated
OMIM233710BTNTvalidated
OMIM306400BTNTvalidated
OMIM613960BTNTvalidated
OMIM618935BTNTvalidated
ICD-10D71NTBTinclusionvalidated
ICD-114A00.0YNTBTindexvalidated
MONDO0018305Evalidated
MeSHD006105Evalidated
UMLSC0018203Evalidated
GARD6100Evalidated
MedDRA10008906Evalidated

E exact · NTBT this ORPHAcode is narrower than the target · BTNT broader than the target · ND not decided.

3

Classification

Preferential parent (Orphanet linearisation):

Parents in the classifications (9):

No children.

4

Genes

6 direct
GeneAssociationStatusHGNCEnsemblOMIMLocusNameSource of validation
CYBC1Disease-causing germline mutation(s) (loss of function) inAssessedHGNC:28672ENSG0000017892761833417q25.3cytochrome b-245 chaperone 130361506[PMID]
CYBADisease-causing germline mutation(s) inAssessedHGNC:2577ENSG0000005152360850816q24.2cytochrome b-245 alpha chain22876374[PMID]
CYBBDisease-causing germline mutation(s) inAssessedHGNC:2578ENSG00000165168300481Xp21.1-p11.4cytochrome b-245 beta chain22876374[PMID]
NCF1Disease-causing germline mutation(s) inAssessedHGNC:7660ENSG000001585176085127q11.23neutrophil cytosolic factor 122876374[PMID]
NCF2Disease-causing germline mutation(s) inAssessedHGNC:7661ENSG000001167016085151q25.3neutrophil cytosolic factor 222876374[PMID]
NCF4Disease-causing germline mutation(s) inAssessedHGNC:7662ENSG0000010036560148822q12.3neutrophil cytosolic factor 422876374[PMID]
5

Prevalence and incidence

27 records
TypeClassValueAreaQualificationValidationSource
Prevalence at birth1-9 / 1 000 0000.46 / 100 000WorldwideValue and classValidatedORPHANET
Point prevalence1-9 / 1 000 000—WorldwideClass onlyValidated[EXPERT]
Prevalence at birth1-9 / 1 000 0000.5 / 100 000United StatesValue and classValidated10844935[PMID]
Point prevalence1-9 / 1 000 000—United StatesClass onlyNot yet validated10844935[PMID]
Prevalence at birth1-9 / 1 000 0000.5 / 100 000EuropeValue and classValidatedORPHANET
Point prevalence1-9 / 1 000 000—EuropeClass onlyValidatedORPHANET
Prevalence at birth1-9 / 1 000 0000.75 / 100 000United KingdomValue and classValidated18410635[PMID]
Point prevalence1-9 / 1 000 000—United KingdomClass onlyValidated18410635[PMID]
Prevalence at birth1-9 / 1 000 0000.57 / 100 000FranceValue and classValidated20700078[PMID]
Point prevalence1-9 / 1 000 000—FranceClass onlyValidated20700078[PMID]
Prevalence at birth1-9 / 1 000 0000.22 / 100 000SwedenValue and classValidated8645957[PMID]
Point prevalence1-9 / 1 000 000—SwedenClass onlyValidated8645957[PMID]
Prevalence at birth1-9 / 1 000 0000.1 / 100 000ItalyValue and classValidated18037347[PMID]
Point prevalence1-9 / 1 000 000—ItalyClass onlyValidated18037347[PMID]
Prevalence at birth1-9 / 1 000 0000.7 / 100 000DenmarkValue and classValidated18708296[PMID]
Point prevalence1-9 / 1 000 000—DenmarkClass onlyValidated18708296[PMID]
Prevalence at birth1-9 / 1 000 0000.48 / 100 000NetherlandsValue and classValidated18708296[PMID]
Point prevalence1-9 / 1 000 000—NetherlandsClass onlyValidated18708296[PMID]
Point prevalence<1 / 1 000 0000.08 / 100 000AustraliaValue and classValidated9314356[PMID]
Prevalence at birth1-9 / 1 000 0000.35 / 100 000JapanValue and classValidated10530081[PMID]
Point prevalence1-9 / 1 000 000—JapanClass onlyValidated10530081[PMID]
Prevalence at birth1-9 / 1 000 0000.34 / 100 000Korea, Republic ofValue and classValidated22787376[PMID]
Point prevalence1-9 / 1 000 000—Korea, Republic ofClass onlyValidated22787376[PMID]
Prevalence at birth1-9 / 1 000 0000.99 / 100 000Latin AmericaValue and classValidated17191150[PMID]_ORPHANET
Point prevalence1-9 / 1 000 000—Latin AmericaClass onlyValidated17191150[PMID]_ORPHANET
Prevalence at birth1-9 / 1 000 0000.53 / 100 000IsraelValue and classValidated18708296[PMID]
Point prevalence1-9 / 1 000 000—IsraelClass onlyValidated18708296[PMID]

Value is Orphadata's ValMoy: the mean estimate per 100 000 for prevalence and incidence, the number of cases or families for case reports.

6

HPO phenotypes

22 annotations · validated 2016-06-01
HPOTerm (as annotated by Orphanet)Diagnostic
Very frequent (99-80%)
HP:0001874Abnormality of neutrophils
HP:0006510Chronic pulmonary obstruction
HP:0000992Cutaneous photosensitivity
HP:0001945Fever
HP:0002240Hepatomegaly
HP:0001034Hypermelanotic macule
HP:0012733Macule
HP:0002024Malabsorption
HP:0100721Mediastinal lymphadenopathy
HP:0000388Otitis media
HP:0002021Pyloric stenosis
HP:0002205Recurrent respiratory infections
HP:0000246Sinusitis
HP:0002575Tracheoesophageal fistula
Occasional (29-5%)
HP:0000964Eczematoid dermatitis
HP:0000230Gingivitis
HP:0100533Inflammatory abnormality of the eye
HP:0100523Liver abscess
HP:0001287Meningitis
HP:0100806Sepsis
HP:0200042Skin ulcer
HP:0001744Splenomegaly

Run the differential on the 12 obligate / very frequent terms

7

Sources for this card