raremaprare-disease reference indexOrphadata 2026-06-23 · HPO 2026-09-01
ORPHA:363611

CTCF-related neurodevelopmental disorder

Type
Disease
Group
Disorder
Inheritance
Autosomal dominant
Age of onset
Antenatal, Childhood, Infancy, Neonatal
Status
active

A rare, genetic, neurodevelopmental disorder characterized by global developmental delay, borderline to severe intellectual disability, feeding difficulties, behavioral anomalies, vision anomalies and mild facial dysmorphism. Other associated features may include microcephaly, short stature, urogenital or palatal anomalies (e.g. cleft palate), minor cardiac defects, recurrent infections or hearing loss.

1

Names in Orphadata languages

12 of 12 languages
LangNameSynonyms
enCTCF-related neurodevelopmental disorder
frTrouble neurologique du développement associé à CTCF
deCTCF-assoziierte neurologische Entwicklungsstörung
esTrastorno del neurodesarrollo asociado a CTCF
itDisordine del neurosviluppo correlata a CTCF
nlCTCF-gerelateerde neurologische ontwikkelingsstoonis
ptDoença do neurodesenvolvimento CTCF-relacionada
plZaburzenie nerwoworozwojowe związane z CTCF
csSyndrom zahrnující mentální retardaci, poruchy příjmu potravy, opoždění vývoje a mikrocefalii
ukПовязане з CTCF порушення нейророзвитку
zh智力障碍-喂养困难-发育迟缓-小头畸形综合征
trZihinsel yetersizlik-beslenme zorlukları-gelişme geriliği-mikrosefali sendromu

Definition in:

2

Cross-references

qualifier = Orphanet mapping relation
SourceCodeQualifierICD relationValidation
OMIM615502Evalidated
ICD-10Q87.8NTBTattributedvalidated
MONDO0014213Evalidated
UMLSC4750955Evalidated

E exact · NTBT this ORPHAcode is narrower than the target · BTNT broader than the target · ND not decided.

3

Classification

Preferential parent (Orphanet linearisation):

Parents in the classifications (2):

No children.

4

Genes

1 direct
GeneAssociationStatusHGNCEnsemblOMIMLocusNameSource of validation
CTCFDisease-causing germline mutation(s) inAssessedHGNC:13723ENSG0000010297460416716q22.1CCCTC-binding factor23746550[PMID]
5

Prevalence and incidence

2 records
TypeClassValueAreaQualificationValidationSource
Cases/families5 casesWorldwideCase(s)Validated28619046[PMID]
Point prevalence<1 / 1 000 000—WorldwideClass onlyValidatedORPHANET_28619046[PMID]

Value is Orphadata's ValMoy: the mean estimate per 100 000 for prevalence and incidence, the number of cases or families for case reports.

6

HPO phenotypes

71 annotations · validated 2019-11-08
HPOTerm (as annotated by Orphanet)Diagnostic
Frequent (79-30%)
HP:0001999Abnormal facial shape
HP:0000164Abnormality of the dentition
HP:0001631Atrial septal defect
HP:0000708Atypical behavior
HP:0000729Autistic behavior
HP:0010059Broad hallux phalanx
HP:0004209Clinodactyly of the 5th finger
HP:0000028Cryptorchidism
HP:0000750Delayed speech and language development
HP:0001508Failure to thrive
HP:0011968Feeding difficulties
HP:0000540Hypermetropia
HP:0001252Hypotonia
HP:0001249Intellectual disability
HP:0000527Long eyelashes
HP:0000675Macrodontia of permanent maxillary central incisor
HP:0000252Microcephaly
HP:0012758Neurodevelopmental delay
HP:0001643Patent ductus arteriosus
HP:0002719Recurrent infections
HP:0001852Sandal gap
HP:0000954Single transverse palmar crease
HP:0001518Small for gestational age
HP:0000486Strabismus
HP:0000574Thick eyebrow
HP:0000219Thin upper lip vermilion
HP:0000233Thin vermilion border
HP:0002119Ventriculomegaly
Occasional (29-5%)
HP:00046912-3 toe syndactyly
HP:0025160Abnormal temper tantrums
HP:0000463Anteverted nares
HP:0000455Broad nasal tip
HP:0006528Chronic lung disease
HP:0000175Cleft palate
HP:0001680Coarctation of aorta
HP:0001363Craniosynostosis
HP:0000378Cupped ear
HP:0000490Deeply set eye
HP:0000286Epicanthus
HP:0025116Fetal distress
HP:0002020Gastroesophageal reflux
HP:0000348High forehead
HP:0002553Highly arched eyebrow
HP:0000316Hypertelorism
HP:0000998Hypertrichosis
HP:0000059Hypoplastic labia majora
HP:0000023Inguinal hernia
HP:0009183Joint contracture of the 5th finger
HP:0000343Long philtrum
HP:0000482Microcornea
HP:0000691Microdontia
HP:0011800Midface retrusion
HP:0001653Mitral regurgitation
HP:0000341Narrow forehead
HP:0000160Narrow mouth
HP:0011470Nasogastric tube feeding in infancy
HP:0000938Osteopenia
HP:0001741Phimosis
HP:0000358Posteriorly rotated ears
HP:0006579Prolonged neonatal jaundice
HP:0001212Prominent fingertip pads
HP:0002092Pulmonary arterial hypertension
HP:0040223Pulmonary hemorrhage
HP:0002783Recurrent lower respiratory tract infections
HP:0000960Sacral dimple
HP:0100806Sepsis
HP:0002000Short columella
HP:0003196Short nose
HP:0000322Short philtrum
HP:0002360Sleep abnormality
HP:0000664Synophrys

Annotation source: 23746550[PMID]_28619046[PMID]

7

Sources for this card