raremaprare-disease reference indexOrphadata 2026-06-23 · HPO 2026-09-01
ORPHA:3440

Waardenburg syndrome

Type
Disease
Group
Disorder
Inheritance
Autosomal dominant, Autosomal recessive
Age of onset
Infancy, Neonatal
Status
active

A rare genetic multiple congenital anomalies characterized by deafness and defects in neural crest-derived structures, including pigmentation anomalies of the eyes, hair, and skin. Four clinical phenotypes are associated with the term ''Waardenburg syndrome'' (WS).

1

Names in Orphadata languages

12 of 12 languages
LangNameSynonyms
enWaardenburg syndrome
frSyndrome de Waardenburg
deWaardenburg-SyndromWS
esSíndrome de Waardenburg
itSindrome di Waardenburg
nlSyndroom van Waardenburg
ptSíndrome Waardenburg
plZespół Waardenburga
csWaardenburgův syndrom
ukСиндром Ваарденбурга
zhWaardenburg综合征
trWaardenburg sendromu

Definition in:

2

Cross-references

qualifier = Orphanet mapping relation
SourceCodeQualifierICD relationValidation
OMIM148820BTNTvalidated
OMIM193500BTNTvalidated
OMIM193510BTNTvalidated
OMIM600193BTNTvalidated
OMIM606662BTNTvalidated
OMIM611584BTNTvalidated
ICD-10E70.3NTBTindexvalidated
ICD-11EC23.2YNTBTindexvalidated
MONDO0018094Evalidated
MeSHD014849Evalidated
UMLSC3266898Evalidated
GARD5525Evalidated
MedDRA10069203Evalidated

E exact · NTBT this ORPHAcode is narrower than the target · BTNT broader than the target · ND not decided.

3

Classification

Preferential parent (Orphanet linearisation):

Parents in the classifications (6):

Children (3):

4

Genes

0 direct · 8 via subtypes

Orphanet records no gene directly on this code.

Recorded by Orphanet on subtypes of this disorder:

GeneSubtypeAssociationStatusHGNCEnsemblOMIMLocusNameSource of validation
EDNRBORPHA:895Waardenburg syndrome type 2Disease-causing germline mutation(s) (loss of function) inAssessedHGNC:3180ENSG0000013616013124413q22.3endothelin receptor type B28236341[PMID]
KITLGORPHA:895Waardenburg syndrome type 2Disease-causing germline mutation(s) inAssessedHGNC:6343ENSG0000004913018474512q21.32KIT ligand26522471[PMID]
MITFORPHA:895Waardenburg syndrome type 2Disease-causing germline mutation(s) inAssessedHGNC:7105ENSG000001870981568453p13melanocyte inducing transcription factor23098757[PMID]
PAX3ORPHA:894Waardenburg syndrome type 1Disease-causing germline mutation(s) inAssessedHGNC:8617ENSG000001359036065972q36.1paired box 320301703[PMID]
PAX3ORPHA:896Waardenburg syndrome type 3Disease-causing germline mutation(s) inAssessedHGNC:8617ENSG000001359036065972q36.1paired box 38447316[PMID]_7726174[PMID]_12949970[PMID]
SNAI2ORPHA:895Waardenburg syndrome type 2Disease-causing germline mutation(s) inAssessedHGNC:11094ENSG000000195496021508q11.21snail family transcriptional repressor 212444107[PMID]
SOX10ORPHA:895Waardenburg syndrome type 2Disease-causing germline mutation(s) inAssessedHGNC:11190ENSG0000010014660222922q13.1SRY-box transcription factor 1021898658[PMID]_17999358[PMID]
TYRORPHA:895Waardenburg syndrome type 2Modifying germline mutation inAssessedHGNC:12442ENSG0000007749860693311q14.3tyrosinase9158138[PMID]
5

Prevalence and incidence

5 records
TypeClassValueAreaQualificationValidationSource
Prevalence at birth1-9 / 1 000 0000.37 / 100 000EuropeValue and classValidated[EXPERT]
Point prevalence1-9 / 100 0001.74 / 100 000United StatesValue and classNot yet validated9279758[PMID]_ORPHANET
Prevalence at birth1-9 / 100 0002.4 / 100 000NetherlandsValue and classValidated9279758[PMID]
Point prevalence1-9 / 100 000—NetherlandsClass onlyNot yet validated9279758[PMID]
Point prevalence1-9 / 100 000—EuropeClass onlyNot yet validatedORPHANET

Value is Orphadata's ValMoy: the mean estimate per 100 000 for prevalence and incidence, the number of cases or families for case reports.

6

HPO phenotypes

32 annotations · validated 2024-06-04
HPOTerm (as annotated by Orphanet)Diagnostic
Very frequent (99-80%)
HP:0001999Abnormal facial shape
HP:0001000Abnormality of skin pigmentation
HP:0000365Hearing impairment
HP:0001100Heterochromia iridisDiagnostic criterion
HP:0005599Hypopigmentation of hairDiagnostic criterion
HP:0001053Hypopigmented skin patchesDiagnostic criterion
HP:0002216Premature graying of hairDiagnostic criterion
HP:0000426Prominent nasal bridge
HP:0000664SynophrysDiagnostic criterion
Frequent (79-30%)
HP:0000534Abnormal eyebrow morphology
HP:0000478Abnormality of the eye
HP:0008527Congenital sensorineural hearing impairmentDiagnostic criterion
HP:0000407Sensorineural hearing impairment
HP:0000506TelecanthusDiagnostic criterion
HP:0000430Underdeveloped nasal alaeDiagnostic criterion
HP:0002211White forelockDiagnostic criterion
HP:0000431Wide nasal bridgeDiagnostic criterion
Occasional (29-5%)
HP:0011024Abnormality of the gastrointestinal tract
HP:0002251Aganglionic megacolon
HP:0100811Aplasia/Hypoplasia of the colon
HP:0000635Blue iridesDiagnostic criterion
HP:0012385Camptodactyly
HP:0034391Elbow contracture
HP:0005214Intestinal obstruction
HP:0002475Myelomeningocele
HP:0000202Orofacial cleft
HP:0009830Peripheral neuropathy
HP:0000508Ptosis
HP:0002414Spina bifida
HP:0002321Vertigo
HP:0008568Vestibular areflexia
HP:0002227White eyelashes

Run the differential on the 9 obligate / very frequent terms

Annotation source: 32809714[PMID]_31375308[PMID]_20127975[PMID]_20301703[PMID]

7

Sources for this card