raremaprare-disease reference indexOrphadata 2026-06-23 · HPO 2026-09-01
ORPHA:261236

16p13.11 microdeletion syndrome

Synonyms: Del(16)(p13.11) · Monosomy 16p13.11

Type
Malformation syndrome
Group
Disorder
Inheritance
Autosomal dominant, Not applicable
Age of onset
Infancy, Neonatal
Status
active

A rare partial deletion of the short arm of chromosome 16 syndrome characterized by global developmental, motor and language delay, epilepsy, neuropsychiatric and behavioral problems, microcephaly, short stature, dysmorphic features (that may include brachycephaly, hypertelorism, epicanthus, down-slanting palpebral fissures, short nose, low-set ears, cleft palate, wide mouth and thin upper lip) and congenital heart defects. Additional clinical features may include gastroesophageal reflux, pectus excavatum, torticollis, ligamentous hyperlaxity, obesity, body temperature instability, syndactyly, cryptorchidism, micropenis, and hypospadias.

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Names in Orphadata languages

12 of 12 languages
LangNameSynonyms
en16p13.11 microdeletion syndromeDel(16)(p13.11) · Monosomy 16p13.11
frSyndrome de microdélétion 16p13.11Del(16)(p13.11) · Monosomie 16p13.11
deMikrodeletionssyndrom 16p13.11Del(16)(p13.11) · Monosomie 16p13.11
esSíndrome de microdeleción 16p13.11Del(16)(p13.11) · Monosomía 16p13.11
itSindrome da microdelezione 16p13.11Del(16)(p13.11) · Monosomia 16p13.11
nl16p13.11-microdeletiesyndroomDel(16)(p13.11) · Monosomie 16p13.11
ptSíndrome de microdeleção 16p13.1
plZespół mikrodelecji 16p13.11Del(16)(p13.11) · Monosomia 16p13.11
csSyndrom mikrodelece 16p13.11Del(16)(p13.11) · Monozomie 16p13.11
ukСиндром мікроделеції 16p13.11Del(16)(p13.11) · Моносомія 16p13.11
zh染色体16p13.11微缺失综合征16p13.11单体
tr16p13.11 mikrodelesyon sendromuDel (16) (p13.11) · Monozomi 16p13.11

Definition in:

2

Cross-references

qualifier = Orphanet mapping relation
SourceCodeQualifierICD relationValidation
ICD-10Q93.5NTBTattributedvalidated
ICD-11LD44.G1NTBTindexvalidated
MONDO0016836Evalidated
UMLSC4304596Evalidated

E exact · NTBT this ORPHAcode is narrower than the target · BTNT broader than the target · ND not decided.

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Classification

Preferential parent (Orphanet linearisation):

Parents in the classifications (1):

No children.

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Genes

0 direct

Orphanet records no gene directly on this code.

5

Prevalence and incidence

2 records
TypeClassValueAreaQualificationValidationSource
Prevalence at birth1-9 / 100 0007 / 100 000WorldwideValue and classNot yet validated24105370[PMID]
Point prevalence<1 / 1 000 000—EuropeClass onlyValidatedORPHANET_23637818[PMID]

Value is Orphadata's ValMoy: the mean estimate per 100 000 for prevalence and incidence, the number of cases or families for case reports.

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HPO phenotypes

40 annotations · validated 2016-06-01
HPOTerm (as annotated by Orphanet)Diagnostic
Very frequent (99-80%)
HP:0000750Delayed speech and language development
HP:0001263Global developmental delay
HP:0010864Intellectual disability, severe
HP:0001328Specific learning disability
Frequent (79-30%)
HP:0000463Anteverted nares
HP:0002197Generalized-onset seizure
HP:0000252Microcephaly
HP:0003196Short nose
HP:0004322Short stature
Occasional (29-5%)
HP:0002269Abnormality of neuronal migration
HP:0001274Agenesis of corpus callosum
HP:0000413Atresia of the external auditory canal
HP:0001631Atrial septal defect
HP:0100490Camptodactyly of finger
HP:0000175Cleft palate
HP:0000204Cleft upper lip
HP:0000722Compulsive behaviors
HP:0000028Cryptorchidism
HP:0009914Cyclopia
HP:0005280Depressed nasal bridge
HP:0000494Downslanted palpebral fissures
HP:0002353EEG abnormality
HP:0002263Exaggerated cupid's bow
HP:0011968Feeding difficulties
HP:0002020Gastroesophageal reflux
HP:0001360Holoprosencephaly
HP:0001276Hypertonia
HP:0000369Low-set ears
HP:0010508Metatarsus valgus
HP:0000767Pectus excavatum
HP:0000384Preauricular skin tag
HP:0100753Schizophrenia
HP:0100716Self-injurious behavior
HP:0000407Sensorineural hearing impairment
HP:0000319Smooth philtrum
HP:0001762Talipes equinovarus
HP:0000219Thin upper lip vermilion
HP:0001629Ventricular septal defect
HP:0002119Ventriculomegaly
HP:0000154Wide mouth

Run the differential on the 4 obligate / very frequent terms

Annotation source: 21315189[PMID]

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Sources for this card