raremaprare-disease reference indexOrphadata 2026-06-23 · HPO 2026-09-01
ORPHA:251056

6q25.2q25.3 microdeletion syndrome

Synonyms: Del(6)(q25.2q25.3) · Monosomy 6q25.2q25.3

Type
Malformation syndrome
Group
Disorder
Inheritance
Not applicable
Age of onset
Infancy, Neonatal
Status
active

6q25 microdeletion syndrome is a recently described syndrome characterized by developmental delay, facial dysmorphism and hearing loss.

1

Names in Orphadata languages

12 of 12 languages
LangNameSynonyms
en6q25.2q25.3 microdeletion syndromeDel(6)(q25.2q25.3) · Monosomy 6q25.2q25.3
frSyndrome de microdélétion 6q25.2q25.3Del(6)(q25.2q25.3) · Monosomie 6q25.2q25.3
deMikrodeletionssyndrom 6q25.2q25.3Del(6)(q25.2q25.3) · Monosomie 6q25.2q25.3
esSíndrome de microdeleción 6q25.2q25.3Del(6)(q25.2q25.3) · Monosomía 6q25.2q25.3
itSindrome da microdelezione 6q25.2q25.3Del(6)(q25.2q25.3) · Monosomia 6q25.2q25.3
nl6q25.2q25.3-microdeletiesyndroomDel(6)(q25.2q25.3) · Monosomie 6q25.2q25.3
ptSíndrome de microdeleção 6q25.2q25.3Del(6)(q25) · Monossomia 6q25
plZespół mikrodelecji 6q25.2q25.3Del(6)(q25) · Monosomia 6q25
csSyndrom mikrodelece 6q25Del(6)(q25) · Monozomie 6q25
ukСиндром мікроделеції 6q25.2q25.3Del(6)(q25) · Моносомія 6q25
zh染色体6q25微缺失综合征6q25单体
tr6q25 mikrodelesyon sendromuDel (6) (q25) · Monozomi 6q25

Definition in:

2

Cross-references

qualifier = Orphanet mapping relation
SourceCodeQualifierICD relationValidation
OMIM612863Evalidated
ICD-10Q93.5NTBTattributedvalidated
ICD-11LD44.60NTBTindexvalidated
MONDO0013025Evalidated
UMLSC4304527Evalidated
GARD3764Evalidated

E exact · NTBT this ORPHAcode is narrower than the target · BTNT broader than the target · ND not decided.

3

Classification

Preferential parent (Orphanet linearisation):

Parents in the classifications (1):

No children.

4

Genes

1 direct
GeneAssociationStatusHGNCEnsemblOMIMLocusNameSource of validation
ARID1BRole in the phenotype ofNot yet assessedHGNC:18040ENSG000000496186145566q25.3AT-rich interaction domain 1B22405089[PMID]
5

Prevalence and incidence

2 records
TypeClassValueAreaQualificationValidationSource
Point prevalence<1 / 1 000 000—WorldwideClass onlyValidatedORPHANET_19034313[PMID]
Cases/families4 casesWorldwideCase(s)Validated19034313[PMID]

Value is Orphadata's ValMoy: the mean estimate per 100 000 for prevalence and incidence, the number of cases or families for case reports.

6

HPO phenotypes

32 annotations · validated 2016-06-01
HPOTerm (as annotated by Orphanet)Diagnostic
Very frequent (99-80%)
HP:0001263Global developmental delay
HP:0001256Intellectual disability, mild
HP:0000252Microcephaly
HP:0000407Sensorineural hearing impairment
Frequent (79-30%)
HP:0012639Abnormal nervous system morphology
HP:0000377Abnormal pinna morphology
HP:0000478Abnormality of the eye
HP:0000504Abnormality of vision
HP:0001274Agenesis of corpus callosum
HP:0000494Downslanted palpebral fissures
HP:0000286Epicanthus
HP:0001508Failure to thrive
HP:0000218High palate
HP:0000316Hypertelorism
HP:0000272Malar flattening
HP:0001357Plagiocephaly
HP:0000358Posteriorly rotated ears
HP:0004322Short stature
HP:0000431Wide nasal bridge
Occasional (29-5%)
HP:0030680Abnormal cardiovascular system morphology
HP:0100490Camptodactyly of finger
HP:0000175Cleft palate
HP:0004209Clinodactyly of the 5th finger
HP:0003241External genital hypoplasia
HP:0001252Hypotonia
HP:0000343Long philtrum
HP:0000347Micrognathia
HP:0001319Neonatal hypotonia
HP:0001838Rocker bottom foot
HP:0001250Seizure
HP:0000582Upslanted palpebral fissure
HP:0002119Ventriculomegaly

Run the differential on the 4 obligate / very frequent terms

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Sources for this card