raremaprare-disease reference indexOrphadata 2026-06-23 · HPO 2026-09-01
ORPHA:1643

Xp22.3 microdeletion syndrome

Synonyms: Del(X)(p23)

Type
Malformation syndrome
Group
Disorder
Inheritance
Not applicable
Age of onset
Neonatal
Status
active

Xp22.3 microdeletion syndrome is a microdeletion syndrome resulting from a partial deletion of the chromosome X. Phenotype is highly variable (depending on length of deletion), but is mainly characterized by X linked ichthyosis, mild-moderate intellectual deficit, Kallmann syndrome, short stature, chondrodysplasia punctata and ocular albinism. Epilepsy, attention deficit-hyperactivity disorder, autism and difficulties with social communication can be associated.

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Names in Orphadata languages

12 of 12 languages
LangNameSynonyms
enXp22.3 microdeletion syndromeDel(X)(p23)
frSyndrome de microdéletion Xp22.3= en
deMikrodeletionssyndrom Xp22.3= en
esSíndrome de microdeleción Xp22.3= en
itSindrome da microdelezione Xp22.3= en
nlXp22.3-microdeletiesyndroom= en
ptSíndrome de microdeleção Xp22.3Deleção Xp22 pter · Monossomia Xp22 pter
plZespół mikrodelecji Xp22.3= en
csSyndrom Xp22.3 mikrodelece= en
ukСиндром мікроделеції Xp22.3= en
zhXp22.3微缺失综合征Xp23缺失
trXp22.3 mikrodelesyon sendromu= en

Definition in:

2

Cross-references

qualifier = Orphanet mapping relation
SourceCodeQualifierICD relationValidation
ICD-10Q99.8NTBTattributedvalidated
MONDO0015606Evalidated
UMLSC4512072Evalidated

E exact · NTBT this ORPHAcode is narrower than the target · BTNT broader than the target · ND not decided.

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Classification

Preferential parent (Orphanet linearisation):

Parents in the classifications (1):

No children.

Codes that Orphanet moved or referred to this one:

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Genes

0 direct

Orphanet records no gene directly on this code.

5

Prevalence and incidence

2 records
TypeClassValueAreaQualificationValidationSource
Cases/families6 casesWorldwideCase(s)Validated12657015[PMID]_32670353[PMID]_1519653[PMID]_17591464[PMID]_18925676[PMID]
Point prevalence<1 / 1 000 000—WorldwideClass onlyValidated12657015[PMID]_32670353[PMID]_1519653[PMID]_17591464[PMID]_18925676[PMID]_ORPHANET

Value is Orphadata's ValMoy: the mean estimate per 100 000 for prevalence and incidence, the number of cases or families for case reports.

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HPO phenotypes

12 annotations · validated 2016-06-01
HPOTerm (as annotated by Orphanet)Diagnostic
Very frequent (99-80%)
HP:0002916Abnormality of chromosome segregation
HP:0000869Secondary amenorrhea
HP:0004322Short stature
Frequent (79-30%)
HP:0008056Aplasia/Hypoplasia affecting the eye
HP:0008065Aplasia/Hypoplasia of the skin
HP:0000144Decreased fertility
HP:0000044Hypogonadotropic hypogonadism
HP:0000545Myopia
HP:0007759Opacification of the corneal stroma
HP:0000147Polycystic ovaries
Occasional (29-5%)
HP:0004397Ectopic anus
HP:0000960Sacral dimple

Run the differential on the 3 obligate / very frequent terms

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Sources for this card