Deletion 5q35 syndrome
Synonyms: Del (5)(q35) · Del (5)(qter) · Distal 5q deletion · Monosomy 5q35 · Telomeric deletion 5q
- Type
- Malformation syndrome
- Group
- Disorder
- Inheritance
- Not applicable, Unknown
- Age of onset
- Antenatal, Neonatal
- Status
- active
Deletion 5q35 refers to the different congenital malformation syndromes resulting from deletions of variable extent of the terminal part of the long arm of chromosome 5 (5q), spanning the region from 5q35.1 to 5q35.3 . The most significant anomaly is a recurring deletion in 5q35.2 comprising the <i>NSD1</i> gene that causes Sotos syndrome that is characterized by cardinal features including excessive growth during childhood, macrocephaly, distinctive facial gestalt and various degrees of learning difficulty. Subtelomeric deletions of the terminal 3.5 Mb region on 5q35.3 are very rare, characterized by prenatal lymphedema with increased nuchal translucency, pronounced muscular hypotonia in infancy, borderline intelligence, postnatal short stature due to growth hormone deficiency, and a variety of minor anomalies such as mildly bell-shaped chest, minor congenital heart defects and a distinct facial gestalt. Larger deletions including bands 5q35.1, 5q35.2 and 5q35.3 cause a more severe phenotype that associates severe developmental delay with microcephaly, and significant cardiac defects (e.g. atrial septal defect with/without atrioventricular conduction defects, Ebstein anomaly, tetralogy of Fallot) linked to haploinsufficiency of <i>NKX2.5</i> (5q35.1). Various combinations of signs may result from deletions of variable extent depending on the genes comprised in the deleted segment.
Names in Orphadata languages
12 of 12 languages| Lang | Name | Synonyms |
|---|---|---|
| en | Deletion 5q35 syndrome | Del (5)(q35) · Del (5)(qter) · Distal 5q deletion · Monosomy 5q35 · Telomeric deletion 5q |
| fr | Syndrome de délétion 5q35 | Del (5)(q35) · Del (5)(qter) · Délétion distale 5q · Délétion télomérique 5q · Monosomie 5q35 |
| de | Deletion 5q35 | Monosomie 5q35 · Telomere Deletion 5q · Del (5)(q35) · Del (5)(qter) · Distale Deletion 5q |
| es | Síndrome de deleción 5q35 | Del (5)(q35) · Del (5)(qter) · Deleción terminal 5q · Monosomía 5q35 |
| it | Sindrome delezione 5q35 | Del (5)(q35) · Del (5)(qter) · Delezione 5q distale · Delezione 5q telomerica · Monosomia 5q35 |
| nl | Deletie 5q35-syndroom | Del (5)(q35) · Del (5)(qter) · Distale 5q deletie · Monosomie 5q35 · Telomerische deletie 5q |
| pt | Síndrome de deleção 5q35 | Monossomia 5q35 |
| pl | Zespół delecji 5q35 | Del (5)(q35) · Del (5)(qter) · Dystalna delecja 5q · Monosomia 5q35 · Telomerowa delecja 5q |
| cs | Delece 5q35 | Del (5)(q35) · Del (5)(qter) · Distální 5q delece · Monozomie 5q35 · Telomerická delece 5q |
| uk | Делеція 5q35 | Del (5)(q35) · Del (5)(qter) · Дистальна делеція 5q · Моносомія 5q35 · Делеція теломерної ділянки 5q |
| zh | 5q35缺失 | 5号染色体长臂末端着丝粒缺失 |
| tr | Delesyon 5q35 | Del(5)(q35) · Del(5)(qter) · Monozomi 5q35 · Distal 5q delesyonu · Telomerik delesyon 5q |
Definition in:
Cross-references
qualifier = Orphanet mapping relation| Source | Code | Qualifier | ICD relation | Validation |
|---|---|---|---|---|
| ICD-10 | Q93.5 | NTBT | attributed | validated |
| ICD-11 | LD44.50 | NTBT | index | validated |
| MONDO | 0015571 | E | validated | |
| MeSH | C537647 | E | validated | |
| UMLS | C2931574 | E | validated |
E exact · NTBT this ORPHAcode is narrower than the target · BTNT broader than the target · ND not decided.
Classification
Preferential parent (Orphanet linearisation):
Parents in the classifications (1):
- ORPHA:262038Partial deletion of the long arm of chromosome 5 syndrome
rare developmental anomalies during embryogenesis; rare genetic diseases
No children.
Genes
2 direct| Gene | Association | Status | HGNC | Ensembl | OMIM | Locus | Name | Source of validation |
|---|---|---|---|---|---|---|---|---|
| NKX2-5 | Role in the phenotype of | Assessed | HGNC:2488 | ENSG00000183072 | 600584 | 5q35.1 | NK2 homeobox 5 | 17910075[PMID] |
| NSD1 | Role in the phenotype of | Assessed | HGNC:14234 | ENSG00000165671 | 606681 | 5q35.3 | nuclear receptor binding SET domain protein 1 | 17910075[PMID] |
Prevalence and incidence
2 records| Type | Class | Value | Area | Qualification | Validation | Source |
|---|---|---|---|---|---|---|
| Cases/families | 10 cases | Worldwide | Case(s) | Validated | 11562936[PMID]_[EXPERT] | |
| Point prevalence | <1 / 1 000 000 | — | Worldwide | Class only | Validated | ORPHANET |
Value is Orphadata's ValMoy: the mean estimate per 100 000 for prevalence and incidence, the number of cases or families for case reports.
HPO phenotypes
14 annotations · validated 2024-12-11| HPO | Term (as annotated by Orphanet) | Diagnostic |
|---|---|---|
| Very frequent (99-80%) | ||
| HP:0001627 | Abnormal heart morphology | |
| Frequent (79-30%) | ||
| HP:0000286 | Epicanthus | |
| HP:0001531 | Failure to thrive in infancy | |
| HP:0000316 | Hypertelorism | |
| HP:0002557 | Hypoplastic nipples | |
| HP:0001252 | Hypotonia | |
| HP:0010880 | Increased nuchal translucency | |
| HP:0002751 | Kyphoscoliosis | |
| HP:0000239 | Large fontanelles | |
| HP:0000256 | Macrocephaly | |
| HP:0001270 | Motor delay | |
| HP:0000768 | Pectus carinatum | |
| HP:0008897 | Postnatal growth retardation | |
| HP:0000470 | Short neck | |
Run the differential on the 1 obligate / very frequent terms
Annotation source: 12900893[PMID]_17910075[PMID]
Sources for this card
- Orphanet page: orpha.net/en/disease/detail/1627
- This record as JSON: /data/d/1627.json